curvature turns to positive value - dimer
Posted: Tue Mar 27, 2018 4:10 pm
Hi Dr. Graeme
I have been running dimer calculation from NEB (when the forces dropped to 0.1 ev) with IOPT 3 (deafult values )and 10^-7 EDIFF.
However as found below in the DIMCAR (a part of it), the curvature turns to positive value in the 2nd dimer step and remains positive.
1 3.20328 1.19596 -559.32186 -1.42461 1.62196
1 3.20328 1.56093 -559.32186 -1.51672 1.48015
1 3.20328 1.40739 -559.32186 -1.55160 1.64754
1 3.20328 1.58550 -559.32186 -1.52112 1.56827
1 3.20328 1.44857 -559.32186 -1.57361 1.57066
1 3.20328 1.46491 -559.32186 -1.59732 1.46059
1 3.20328 1.34865 -559.32186 -1.64307 1.44938
1 3.20328 1.33273 -559.32186 -1.66296 1.34360
1 3.20328 1.23333 -559.32186 -1.70246 1.35402
1 3.20328 1.23887 -559.32186 -1.72034 1.23610
1 3.20328 1.11012 -559.32186 -1.77015 1.20633
1 3.20328 1.08400 -559.32186 -1.78433 1.14711
1 3.20328 1.08233 -559.32186 -1.78553 1.21828
1 3.20328 1.11245 -559.32186 -1.78957 1.07243
1 3.20328 0.95861 -559.32186 -1.83143 1.11884
2 1.36951 1.18359 -559.38358 0.12926 1.09578
2 1.36951 0.98116 -559.38358 0.09646 0.87254
3 1.36890 1.12184 -559.38327 0.26832 1.60432
3 1.36890 1.37849 -559.38327 0.22727 1.01618
3 1.36890 0.85105 -559.38327 0.20411 0.84590
4 1.36938 1.08355 -559.38280 0.15492 1.05364
4 1.36938 0.97540 -559.38280 0.14382 0.99097
5 1.36976 1.29505 -559.38215 0.29377 1.23676
please let me know what I need to change here to remain near a saddle (I kept DROTmax to 20 to make sure curvature goes negative in 1st step and torque is low). I have let it run till another 10 or more dimer steps but still positive.
Also is there anyway I can restart the dimer from step 1 where it ended or I need to redo from the beginning.
Thanks a lot
I have been learning a lot from you.
I have been running dimer calculation from NEB (when the forces dropped to 0.1 ev) with IOPT 3 (deafult values )and 10^-7 EDIFF.
However as found below in the DIMCAR (a part of it), the curvature turns to positive value in the 2nd dimer step and remains positive.
1 3.20328 1.19596 -559.32186 -1.42461 1.62196
1 3.20328 1.56093 -559.32186 -1.51672 1.48015
1 3.20328 1.40739 -559.32186 -1.55160 1.64754
1 3.20328 1.58550 -559.32186 -1.52112 1.56827
1 3.20328 1.44857 -559.32186 -1.57361 1.57066
1 3.20328 1.46491 -559.32186 -1.59732 1.46059
1 3.20328 1.34865 -559.32186 -1.64307 1.44938
1 3.20328 1.33273 -559.32186 -1.66296 1.34360
1 3.20328 1.23333 -559.32186 -1.70246 1.35402
1 3.20328 1.23887 -559.32186 -1.72034 1.23610
1 3.20328 1.11012 -559.32186 -1.77015 1.20633
1 3.20328 1.08400 -559.32186 -1.78433 1.14711
1 3.20328 1.08233 -559.32186 -1.78553 1.21828
1 3.20328 1.11245 -559.32186 -1.78957 1.07243
1 3.20328 0.95861 -559.32186 -1.83143 1.11884
2 1.36951 1.18359 -559.38358 0.12926 1.09578
2 1.36951 0.98116 -559.38358 0.09646 0.87254
3 1.36890 1.12184 -559.38327 0.26832 1.60432
3 1.36890 1.37849 -559.38327 0.22727 1.01618
3 1.36890 0.85105 -559.38327 0.20411 0.84590
4 1.36938 1.08355 -559.38280 0.15492 1.05364
4 1.36938 0.97540 -559.38280 0.14382 0.99097
5 1.36976 1.29505 -559.38215 0.29377 1.23676
please let me know what I need to change here to remain near a saddle (I kept DROTmax to 20 to make sure curvature goes negative in 1st step and torque is low). I have let it run till another 10 or more dimer steps but still positive.
Also is there anyway I can restart the dimer from step 1 where it ended or I need to redo from the beginning.
Thanks a lot
I have been learning a lot from you.