Runtime I/O error in neb.F (neb.f90)
Posted: Fri Jul 06, 2007 6:03 pm
I have been experiencing a problem at runtime, independent of compiler (it is exhibited in the latest Pathscale, Portland, and the latest Intel) pointing to a formatted/unformatted file conflict. Reverting to an older version of the VTST tools, the problem no longer presents itself - it comes up in the most recent release (2.03 I believe) downloaded within the last week. The cluster on which this is running is an Intel Core 2 platform running RHEL4 and using mpich 1.2.7. The problem occurs on other similar platforms (Opteron w/ Infiniband) as well, so it appears to be platform and MPI independent as well. Is this something that has been previously observed? Please let me know if any further information is needed.
Below is the output from the most informative compilation (pgf90):
1 F= -.92727089E+03 E0= -.92728740E+03 d E =-.927271E+03 mag= 27.4336
BRION: g(F)= 0.187E+00 g(S)= 0.000E+00
bond charge predicted
N E dE d eps ncg rms
rms(c)
RMM: 1 -0.232085386940E+03 -0.23209E+03 -0.12561E+01 4833 0.603E+00
0.127E+00
RMM: 2 -0.231972688443E+03 0.11270E+00 -0.36162E-01 4874 0.763E-01
0.129E+00
RMM: 3 -0.231971369887E+03 0.13186E-02 -0.21210E-02 4849 0.307E-01
0.234E+00
RMM: 4 -0.231944647764E+03 0.26722E-01 -0.12066E-02 4857 0.287E-01
0.106E+00
RMM: 5 -0.231959827324E+03 -0.15180E-01 -0.10017E-02 4831 0.260E-01
0.100E+00
RMM: 6 PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file confli
ct.
File name = 01/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file conflict.
File name = 04/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file conflict.
File name = 03/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file conflict.
File name = 02/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
p11_2080: p4_error: net_recv read: probable EOF on socket: 1
rm_l_11_2101: (5040.644531) net_send: could not write to fd=5, errno = 32
[...]
Below is the output from the most informative compilation (pgf90):
1 F= -.92727089E+03 E0= -.92728740E+03 d E =-.927271E+03 mag= 27.4336
BRION: g(F)= 0.187E+00 g(S)= 0.000E+00
bond charge predicted
N E dE d eps ncg rms
rms(c)
RMM: 1 -0.232085386940E+03 -0.23209E+03 -0.12561E+01 4833 0.603E+00
0.127E+00
RMM: 2 -0.231972688443E+03 0.11270E+00 -0.36162E-01 4874 0.763E-01
0.129E+00
RMM: 3 -0.231971369887E+03 0.13186E-02 -0.21210E-02 4849 0.307E-01
0.234E+00
RMM: 4 -0.231944647764E+03 0.26722E-01 -0.12066E-02 4857 0.287E-01
0.106E+00
RMM: 5 -0.231959827324E+03 -0.15180E-01 -0.10017E-02 4831 0.260E-01
0.100E+00
RMM: 6 PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file confli
ct.
File name = 01/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file conflict.
File name = 04/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file conflict.
File name = 03/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
PGFIO-F-215/unformatted write/unit=8/formatted/unformatted file conflict.
File name = 02/OUTCAR formatted, sequential access record = 2705
In source file neb.f90, at line number 254
p11_2080: p4_error: net_recv read: probable EOF on socket: 1
rm_l_11_2101: (5040.644531) net_send: could not write to fd=5, errno = 32
[...]