Dear all, I have a question about how to obtain the intermediate states
after finding the saddle point with DIMER method. If the NEB method is
used, it is easy to get the intermediate states, because before starting a
neb calculation a chain of states linking the initial and finals states should
be given. However, for the dimer calculation, only two initial states are
need and two images near the saddle point are obtained. So if I want to
know the intermediate states between the initial state and saddle point,
what should I do?
Whether I still need to use the initial state and the saddle point as the
starting images to perform a neb calculation?
On the other hand, I check the energy of each image printed in OUTCAR,
and find the energy first goes up and then down to the saddle point. So I
think none of the structures generated in the process of searching the
saddle point recorded in OUTCAR is the intermediate state between the
initial state and the saddle point, right?
Thanks a lot!
how to get the intermediate states with DIMER method?
Moderator: moderators
Once you have a saddle use a dimer calculation, you can find the associated minima by doing a conservative minimization on either side of the saddle. You can generate initial configurations for these two minimization runs using our interpolate.pl script, for example:
interpolate.pl 01/POSCAR 02/POSCAR -100.0
interpolate.pl 01/POSCAR 02/POSCAR 100.0
This minima could be your initial and final states, or some intermediate(s) along the way.
interpolate.pl 01/POSCAR 02/POSCAR -100.0
interpolate.pl 01/POSCAR 02/POSCAR 100.0
This minima could be your initial and final states, or some intermediate(s) along the way.