Search found 17 matches

by jasius
Tue May 06, 2014 8:19 pm
Forum: VTSTTools
Topic: ions don't move
Replies: 2
Views: 9774

Re: ions don't move

An update: I switched to VASP optimizer via

#dynamic
IOPT = 0
#IBRION = 3
#POTIM = 0.1
NSW = 350

POTIM = 0.2
IBRION = 1

and ions started moving. Does that mean I did somethign wrong specifying VTST optimization or VTST compilation is wrong? could you advise?

Jonas
by jasius
Tue May 06, 2014 8:11 pm
Forum: VTSTTools
Topic: ions don't move
Replies: 2
Views: 9774

ions don't move

Greame,

I am working with 5.3.3 they just compiled with VTST and getting strangest effect where ions are not moved at all in selective dynamics. I triple checked my input and see no reasons for it. I attached the files, perhaps it's VTST compilation error so I can inform my admins

Jonas
by jasius
Thu Feb 13, 2014 9:51 pm
Forum: VTSTTools
Topic: TS search of CH4 on Ni(111)
Replies: 3
Views: 11118

Re: TS search of CH4 on Ni(111)

So specifically, I relax convergence criteria, locate TS, then I take what for the restart? the resulting 01 through 08 CONCTAR files and restart with them? thanks
Jonas
by jasius
Thu Feb 13, 2014 3:56 pm
Forum: VTSTTools
Topic: TS search of CH4 on Ni(111)
Replies: 3
Views: 11118

TS search of CH4 on Ni(111)

Dear Graeme,

I am trying a rather standard TS search of CH4 on Ni(111), I know you've tried it and published. I must admit that I am not in a good grasp of how to tweak parameters (or input coordinates, for that matter) to obtain the converged TS search, such as this one, most of the times it's hit ...
by jasius
Sat Dec 28, 2013 5:15 am
Forum: VTSTTools
Topic: VTST optimizer stops
Replies: 5
Views: 12408

Re: VTST optimizer stops

figured might be better if I added the makefile as well
by jasius
Sat Dec 28, 2013 4:33 am
Forum: VTSTTools
Topic: VTST optimizer stops
Replies: 5
Views: 12408

Re: VTST optimizer stops

there we go, see attached. strangest thing, I am sure it's a problem with compile but not sure what went wrong, not enough experience, I could post makefile if you need it
by jasius
Fri Dec 27, 2013 5:20 pm
Forum: VTSTTools
Topic: VTST optimizer stops
Replies: 5
Views: 12408

Re: VTST optimizer stops

strange thing, I can;t upload, when I click Add the file it uploads something but then it refreshes the page and there is no file added
by jasius
Fri Dec 27, 2013 11:11 am
Forum: VTSTTools
Topic: VTST optimizer stops
Replies: 5
Views: 12408

VTST optimizer stops

Merry Christmas, Graeme et al.

I have recently compiled VASP 4.6 +VTST and have tremendous problems gettign VTST to work. When I turn VTST optimizer on, calculation aborts with bunch of core dump files and no particular error. I I try the same settings on VASP optimizer, it has no problems. Any ...
by jasius
Tue Dec 17, 2013 8:50 pm
Forum: VTSTTools
Topic: NEB optimization fluctuating
Replies: 4
Views: 10685

Re: NEB optimization fluctuating

much appreciated. my attempts with INVCURV=0.001 ran out of cycles
by jasius
Tue Dec 17, 2013 12:12 pm
Forum: VTSTTools
Topic: unspecified error at the gradient step
Replies: 3
Views: 12234

Re: unspecified error at the gradient step

again, no problems with VASP optimizer
by jasius
Tue Dec 17, 2013 12:11 pm
Forum: VTSTTools
Topic: unspecified error at the gradient step
Replies: 3
Views: 12234

Re: unspecified error at the gradient step

Graeme, no, there is something else happening, it aborts, not finishes, I decreased the convergence criteria to a very small value (0.005) it still aborts after this first SCF converged at FORCES: max atom, RMS 0.046597 0.016415

running on 12 nodes
distr: one band on 1 nodes, 12 groups
vasp.4.6 ...
by jasius
Mon Dec 16, 2013 10:48 pm
Forum: VTSTTools
Topic: unspecified error at the gradient step
Replies: 3
Views: 12234

unspecified error at the gradient step

sorry for so many messages, I just compiled so it's a learning curve for me. I compiled 4.6 with VTST tools and during the geometry optimization I am getting an unspecified error after the first SCF step. If I do it outside VTST with
IOPT = 0 ! use VTST optimizer
IBRION = 1
POTIM = 0.5
I am getting ...
by jasius
Mon Dec 16, 2013 6:42 pm
Forum: VTSTTools
Topic: NEB optimization fluctuating
Replies: 4
Views: 10685

Re: NEB optimization fluctuating

I will try your suggestion. I also attached the images. Besides the fluctuation, a conceptual question, albeit not very relevant to the software is: how do I create this planar CH3 TS. As it is now, it's simply CH3 shift/transfer, it should be planar CH3 as in SN2 type mechanism

Jonas
by jasius
Mon Dec 16, 2013 6:06 pm
Forum: VTSTTools
Topic: dimer compilation problem
Replies: 3
Views: 10727

Re: dimer compilation problem

4.6. I searched for the solution and deleted the lines suggested, seemed to have compiled so far, thanks

Jonas
by jasius
Mon Dec 16, 2013 3:52 pm
Forum: VTSTTools
Topic: dimer compilation problem
Replies: 3
Views: 10727

Re: dimer compilation problem

of course, I am searching other reported problems like this but with my luck I might miss something obvious