Search found 117 matches
- Thu Sep 20, 2012 11:20 pm
- Forum: VTSTTools
- Topic: Instanton code in VTST
- Replies: 1
- Views: 41106
Re: Instanton code in VTST
I haven't used it in about six years now, but my guess is that the images are moving more slowly than usual since the forces are actually scaled with the number of images in the FPI chain. For that reason the forces are smaller than you might be used to.
- Wed May 13, 2009 10:07 pm
- Forum: VTSTTools
- Topic: extra line in POSCAR by nebmake.pl
- Replies: 5
- Views: 96368
Re: extra line in POSCAR by nebmake.pl
No, it is much simpler just to add the "Seletive dynamics" tag to the original POSCAR files. It will not negatively affect your calculations, see http://cms.mpi.univie.ac.at/vasp/vasp/node61.html
Or you can probably delete the extra blank line as well.
Or you can probably delete the extra blank line as well.
- Wed May 13, 2009 5:09 pm
- Forum: VTSTTools
- Topic: extra line in POSCAR by nebmake.pl
- Replies: 5
- Views: 96368
Re: extra line in POSCAR by nebmake.pl
You get the blank line since the script wants to read in a "Selective dynamics" line between the line listing number of atoms and "Direct".
- Tue May 12, 2009 3:58 pm
- Forum: VTSTTools
- Topic: extra line in POSCAR by nebmake.pl
- Replies: 5
- Views: 96368
Re: extra line in POSCAR by nebmake.pl
Can you post the header of your original POSCAR file?
- Tue May 05, 2009 9:02 pm
- Forum: VTSTTools
- Topic: Using con2xyz.pl
- Replies: 2
- Views: 60519
Re: Using con2xyz.pl
Because of historical reasons you first need to run vasp2con.pl (as vasp2con.pl CONTCAR) which will generate a CONTCAR.con file. Then use con2xyz.pl on the new .con file.
- Sun Apr 26, 2009 4:58 pm
- Forum: VTSTTools
- Topic: Simple question on DYNMAT
- Replies: 6
- Views: 142634
Re: Simple question on DYNMAT
Plus this implementation uses forward difference while IBRION = 5 uses centered (or higher). So it will require half as many steps to build up the Hessian matrix.
- Sat Apr 11, 2009 6:39 pm
- Forum: VTSTTools
- Topic: about the neb2dim.pl script
- Replies: 5
- Views: 154193
Re: about the neb2dim.pl script
I had to add
use FindBin qw($Bin);
use lib "$Bin";
to the top of the script.
I also made the (unnecessary) following change.
$d12 = `$Bin/dist.pl $d1/POSCAR $d2/POSCAR` ;
# open (DIST, "$Bin/dist.pl $d1/POSCAR $d2/POSCAR |") ;
# $d12 = <DIST> ; close DIST ;
If it works, report back and it ...
use FindBin qw($Bin);
use lib "$Bin";
to the top of the script.
I also made the (unnecessary) following change.
$d12 = `$Bin/dist.pl $d1/POSCAR $d2/POSCAR` ;
# open (DIST, "$Bin/dist.pl $d1/POSCAR $d2/POSCAR |") ;
# $d12 = <DIST> ; close DIST ;
If it works, report back and it ...
- Thu Jan 22, 2009 10:47 am
- Forum: VTSTTools
- Topic: error Can't locate Vasp.pm in @INC
- Replies: 1
- Views: 59345
Re: error Can't locate Vasp.pm in @INC
Did you download the entire .tar.gz package or just the nebmake.pl script?
- Thu Nov 20, 2008 12:28 am
- Forum: Bader
- Topic: Bader test case on vasp
- Replies: 2
- Views: 76073
Re: Bader test case on vasp
Your results look good to me as well. They are for instance very symmetric. Based on the difference in electronegativity, As has a higher value than Si, it may be reasonable to expect As to attract electrons towards it resulting in a 5+ value.
- Fri Nov 14, 2008 12:25 am
- Forum: Bader
- Topic: Difference in charges
- Replies: 2
- Views: 82523
Re: Difference in charges
There was a slight error in the code as it was originally implemented and reported in the Comp. Mat. Sci 2006 article. This as now been subsequently been corrected, see the latter two publications at the website (http://theory.cm.utexas.edu/vtsttools/bader). The smaller error you mention is probably ...
- Mon Nov 10, 2008 10:26 pm
- Forum: VTSTTools
- Topic: about the secondary-saddle point
- Replies: 2
- Views: 110039
Re: about the secondary-saddle point
It is of course meaningful to search for 2nd order saddle points. The dimer method as implemented in VASP will not however converge to such a saddle since it maximizes the potential energy function in only one degree of freedom while minimizing in all other. You might perhaps get some idea about the ...
- Tue Nov 04, 2008 11:53 pm
- Forum: VTSTTools
- Topic: using NEB medium accuracy output to perform high accuracy!
- Replies: 5
- Views: 154140
Re: using NEB medium accuracy output to perform high accuracy!
How low are the forces in the original band? Is it possible that you are not using the same POTCAR file in the two runs?
- Mon Aug 25, 2008 3:48 pm
- Forum: Bader
- Topic: FFT grid resolution convergence problem
- Replies: 4
- Views: 126631
Re: FFT grid resolution convergence problem
Can you post your error?
- Fri Aug 22, 2008 10:02 pm
- Forum: Bader
- Topic: FFT grid resolution convergence problem
- Replies: 4
- Views: 126631
Re: FFT grid resolution convergence problem
Have you read through viewtopic.php?f=1&t=368 ? It's a similar system.
- Fri Aug 15, 2008 4:31 pm
- Forum: VTSTTools
- Topic: wrong transition state with vasp
- Replies: 3
- Views: 104179
Re: wrong transition state with vasp
Is that with IBRION = 1? Is so, you should really look into using the optimizers developed by the Henkelman group instead. See http://theory.cm.utexas.edu/vtsttools/optimizers/ and JCP , 128(13), 134106, 2008