Search found 117 matches
- Wed Jun 21, 2006 7:08 pm
- Forum: VTSTTools
- Topic: how to improve the activation energy with NEB?
- Replies: 7
- Views: 18448
Well, there are couple of problems that see by quickly scanning over your INCAR file. The dimer uses a finite difference scheme where the local curvature is estimated by the force difference in two points, that very close to each other. It is paramount then to calculate the force as accurately as po...
- Wed Jun 21, 2006 2:45 am
- Forum: VTSTTools
- Topic: how to improve the activation energy with NEB?
- Replies: 7
- Views: 18448
- Wed Jun 21, 2006 2:43 am
- Forum: VTSTTools
- Topic: writing WVAECAR in NEB calculations?
- Replies: 2
- Views: 9514
I like the setup we have now for handling WAVECAR files. If people like to use them in a subsequent run then then there is nothing simpler than coping them back from the saved directory and un-zipping them. I prefer the simplicity over adding a tag or something to decide the a copy of the WAVECAR sh...
- Wed Jun 21, 2006 2:39 am
- Forum: VTSTTools
- Topic: which is the preference for EDIFFG flag ?
- Replies: 3
- Views: 12366
I usually like to converge the forces to values lower than 0.03 but that's of course just my own preference and not an empirical truth. When I start a new NEB calculation I often start with setting EDDIFG = -0.01. If that converges I decrease it to -0.005 and continue. I then continue in this fashio...
- Thu Jun 15, 2006 10:54 pm
- Forum: VTSTTools
- Topic: how to improve the activation energy with NEB?
- Replies: 7
- Views: 18448
It is a bit hard to know why the dimer is converging slowly without all the input parameters. Maybe you could send us your run so we can take a look at it to see if there is something obviously wrong. Also make sure to use exactly the same setup as described for the DACAPO calculations, including us...
- Thu Jun 15, 2006 10:41 pm
- Forum: VTSTTools
- Topic: Neb calculation fails
- Replies: 2
- Views: 10817
I don't really see any problem with the POSCAR file but we recommend setting the element symbols in the top line for our scripts to work properly, like: Ru N H 10.7876184200000 1.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.8660436140083640 0.0000000000000000 0.0000000...
- Wed Jun 14, 2006 9:28 pm
- Forum: VTSTTools
- Topic: how to improve the activation energy with NEB?
- Replies: 7
- Views: 18448
First off, are you using our implementation of NEB (available at http://theory.cm.utexas.edu/vtsttools/) and what are the other calculations that you are comparing with? Are your calculations converged w.r.t. number of k-points, system size, spin, etc. What about pseudo-potentials and planewave ener...
- Wed Jun 14, 2006 9:17 pm
- Forum: VTSTTools
- Topic: NEB pathways across unit cell boundaries
- Replies: 5
- Views: 14895
Our NEB implementation should be airtight in regards to that aspect. I have never had any problems with it, but I guess anything is possible. But I usually try to set up the calculations in such a way that any boundary crossing is unlikely. So if you witness any funny business with our implementatio...
- Tue Jun 13, 2006 4:38 pm
- Forum: VTSTTools
- Topic: which is the preference for EDIFFG flag ?
- Replies: 3
- Views: 12366
- Wed May 31, 2006 7:21 pm
- Forum: VTSTTools
- Topic: how to use nab method with vasp
- Replies: 6
- Views: 23644
The vtstscripts packages contains many scripts that rely on output generated by our additions to VASP in vtstcode. But the nebmake.pl should work fine for you (as you have tried) even though you don't have the files in vtstcode compiled with VASP. Most of the scripts though you will have to use at y...
- Tue May 30, 2006 6:57 pm
- Forum: VTSTTools
- Topic: how to use nab method with vasp
- Replies: 6
- Views: 23644
To set up a NEB calculation, using our toolbox, you begin with your initial and final images (say POSCAR_1 and POSCAR_2). Then you use the nebmake.pl script available as a part of vtstsscripts (http://theory.cm.utexas.edu/vtsttools/downloads/). See http://theory.cm.utexas.edu/vtsttools/scripts/ for ...
- Wed May 17, 2006 6:41 pm
- Forum: VTSTTools
- Topic: Several maxima and minima with CI-NEB
- Replies: 4
- Views: 15532
- Fri May 05, 2006 6:10 pm
- Forum: VTSTTools
- Topic: why does it always let me LOG IN when submitting?
- Replies: 3
- Views: 11348
- Fri May 05, 2006 2:23 am
- Forum: VTSTTools
- Topic: How to prepare input files for LANCZOS?
- Replies: 3
- Views: 14544
The configuration is always in the POSCAR. The MODECAR contains the unstable mode, or the current guess for it. It will be generated at the end of each Lanczos step and if one is in place when a run is initiated then it will be read and the mode used as an initial guess for the Lanczos procedure ins...
- Thu May 04, 2006 4:41 am
- Forum: VTSTTools
- Topic: How to prepare input files for LANCZOS?
- Replies: 3
- Views: 14544
Yes, a saddle point run using the Lanczos method uses the same input file as usual, i.e. POTCAR, KPOINTS, POSCAR and INCAR. A MODECAR is not strictly necessary for it to work. Note that there are no 01, 02 etc. subdirectories as for NEB or dimer runs. This is more like a regular structural minimizat...