Dear Graeme:
After taking your advice, I start frozen lowest layers to calculate the dimer method in my system. It still can’t converge after running 2000 step. My content of INCAR:
System = dimer
ISMEAR = -1
SIGMA = 0.1
NSW = 3000
ENCUT = 600
ALGO = Fast
ISIF = 2
GGA = 91
LREAL = Auto
NPAR = 16 ...
Search found 6 matches
- Thu Jan 31, 2008 5:31 am
- Forum: VTSTTools
- Topic: about dynamical matrix calculation
- Replies: 9
- Views: 22041
- Mon Jan 21, 2008 1:50 pm
- Forum: VTSTTools
- Topic: about dynamical matrix calculation
- Replies: 9
- Views: 22041
Re: about dynamical matrix calculation
Dear Graeme:
the Initial state have negative modes is my human error indeed, thank you for help. when i do this calculation, i find a very important problem, this is, how to decide which atom i should fix? for any kind of calculation(NEB、dimer、dynamical matrix), is it have the same standard? my ...
the Initial state have negative modes is my human error indeed, thank you for help. when i do this calculation, i find a very important problem, this is, how to decide which atom i should fix? for any kind of calculation(NEB、dimer、dynamical matrix), is it have the same standard? my ...
- Sat Jan 19, 2008 3:31 pm
- Forum: VTSTTools
- Topic: about dynamical matrix calculation
- Replies: 9
- Views: 22041
Re: about dynamical matrix calculation
Dear Graeme:
thanks for your help, i have finished the dynamical matrix calculation and have produced the freq.dat of minimum and freq.dat of transition state by dymmatrix.pl.but The message appear "Initial state freq.dat has imaginary frequencies" when i use dymprefactor.pl. my content of initial ...
thanks for your help, i have finished the dynamical matrix calculation and have produced the freq.dat of minimum and freq.dat of transition state by dymmatrix.pl.but The message appear "Initial state freq.dat has imaginary frequencies" when i use dymprefactor.pl. my content of initial ...
- Fri Jan 18, 2008 8:04 am
- Forum: VTSTTools
- Topic: about dynamical matrix calculation
- Replies: 9
- Views: 22041
Rne: about dynamical matrix calculatio
Dear Graeme:
thanks for your response. because i don't quiet understand the structure of DISPLACECAR. so I don't understand you say '"displacement of about 0.005 for each non-frozen degree of freedom '" is to edit which part of DISPLACECAR. the content of my DISPLACECAR is:
1 2 3 4 5
0.87283 0 ...
thanks for your response. because i don't quiet understand the structure of DISPLACECAR. so I don't understand you say '"displacement of about 0.005 for each non-frozen degree of freedom '" is to edit which part of DISPLACECAR. the content of my DISPLACECAR is:
1 2 3 4 5
0.87283 0 ...
- Fri Jan 18, 2008 5:49 am
- Forum: VTSTTools
- Topic: about dynamical matrix calculation
- Replies: 9
- Views: 22041
about dynamical matrix calculation
I do dynamical matrix calculation and don’t sure my procedure is correct. Please help me check.
1. Initial data: I take initial and transition state got by previously NEB result to be my initial and finial state of dynamical matrix calculation.
2. Producing file: I make 4 image file between initial ...
1. Initial data: I take initial and transition state got by previously NEB result to be my initial and finial state of dynamical matrix calculation.
2. Producing file: I make 4 image file between initial ...
- Thu Oct 11, 2007 6:18 pm
- Forum: VTSTTools
- Topic: A NEB question
- Replies: 1
- Views: 6727
A NEB question
Dear professor:
I got the problem while using NEB calculation to find the energy barrier. My energy curve produces well at first. After seven ionic steps my eighth image energy rises highly. I observe my eighth image by VMD and find the dissociating N2 vibrates on the surface. Finally the N2 ...
I got the problem while using NEB calculation to find the energy barrier. My energy curve produces well at first. After seven ionic steps my eighth image energy rises highly. I observe my eighth image by VMD and find the dissociating N2 vibrates on the surface. Finally the N2 ...