Well, I guess you are right. Using the script chgcarsum.pl seems to work and I get the charges with the old and new method.
Thank you for your efforts and hopefully the weight method overcomes the slow convergence with repsect to the number of grid points, which is quite painful for isolated ...
Search found 8 matches
- Fri Jan 22, 2016 8:40 am
- Forum: Bader
- Topic: Divid by zero in matrix inverse
- Replies: 5
- Views: 19359
- Wed Jan 20, 2016 2:38 pm
- Forum: Bader
- Topic: Divid by zero in matrix inverse
- Replies: 5
- Views: 19359
Re: Divid by zero in matrix inverse
Here are the files. I usually use my own program to sum the charge densities AECCAR0 and AECCAR2. My program also led to another minor "bug" in v0.28 which occurred due to the usage of atomic coordinates in double precision, which could not be read correctly by your Bader analysis tool.
https ...
https ...
- Tue Jan 19, 2016 5:02 pm
- Forum: Bader
- Topic: Divid by zero in matrix inverse
- Replies: 5
- Views: 19359
Re: Divid by zero in matrix inverse
Thank you for your reply. The files are comparable large. I'll send the files asap.
Best regards
Lars
Best regards
Lars
- Tue Jan 19, 2016 1:05 pm
- Forum: Bader
- Topic: Divid by zero in matrix inverse
- Replies: 5
- Views: 19359
Divid by zero in matrix inverse
Dear developers,
recently I used your new Beta version 0.95, basically to check out your new weight method with VASP.
However, already before I could try I encountered a strange new error, which did not occur in version 0.28.
The error message is:
Divid by zero in matrix inverse
Some details ...
recently I used your new Beta version 0.95, basically to check out your new weight method with VASP.
However, already before I could try I encountered a strange new error, which did not occur in version 0.28.
The error message is:
Divid by zero in matrix inverse
Some details ...
- Thu May 12, 2011 2:06 pm
- Forum: Bader
- Topic: Asymmetric Charges in Graphene and bug(?) in output
- Replies: 8
- Views: 31046
Re: Asymmetric Charges in Graphene and bug(?) in output
Thanks a lot for this information, I didn't know that in case of highly symmetric system the method scales worse then for 'noisy' systems. In the end I want to compare charge transfer of molecules adsorbed on graphene. Therefore, I need supercells of graphene containing more then 150 carbon atoms ...
- Tue May 10, 2011 12:25 am
- Forum: Bader
- Topic: Asymmetric Charges in Graphene and bug(?) in output
- Replies: 8
- Views: 31046
Re: Asymmetric Charges in Graphene and bug(?) in output
As you suggested I used a 48x48x(144) FFT grid and now I obtained the following expected (correct) results with Voronoi decomposition:
VORONOI ANALYSIS RESULT
# X Y Z CHARGE ATOMIC VOL
----------------------------------------------------------------------
1 0.0000 2.6741 13.9999 4.0003 259.4105 ...
VORONOI ANALYSIS RESULT
# X Y Z CHARGE ATOMIC VOL
----------------------------------------------------------------------
1 0.0000 2.6741 13.9999 4.0003 259.4105 ...
- Mon May 09, 2011 11:43 pm
- Forum: Bader
- Topic: Asymmetric Charges in Graphene and bug(?) in output
- Replies: 8
- Views: 31046
Re: Asymmetric Charges in Graphene and bug(?) in output
Thank you for your reply.
The asymmetry is preserved even for Voronoi decomposition of the density.
I'm still worried about the order of magnitude of the deviations between expected charge (4 electrons per atom) and obtained charge with Bader/Voronoi analysis (3.89 and 4.11 electrons) because it ...
The asymmetry is preserved even for Voronoi decomposition of the density.
I'm still worried about the order of magnitude of the deviations between expected charge (4 electrons per atom) and obtained charge with Bader/Voronoi analysis (3.89 and 4.11 electrons) because it ...
- Mon May 09, 2011 3:54 pm
- Forum: Bader
- Topic: Asymmetric Charges in Graphene and bug(?) in output
- Replies: 8
- Views: 31046
Asymmetric Charges in Graphene and bug(?) in output
Hi,
I used Quantum Espresso to calculate the charge density distribution for graphene (hexagonal). For the calculations four valence electrons per carbon atom have been considered, the remaining two electrons have been treated within the framework of pseudopotentials. Although I expect a symmetric ...
I used Quantum Espresso to calculate the charge density distribution for graphene (hexagonal). For the calculations four valence electrons per carbon atom have been considered, the remaining two electrons have been treated within the framework of pseudopotentials. Although I expect a symmetric ...