Search found 39 matches

by kambiz
Mon Apr 14, 2014 7:53 am
Forum: Bader
Topic: dummy questions about Bader charges
Replies: 1
Views: 63231

dummy questions about Bader charges

Hi,
Dear all

I have some dummy questions about Bader charges and I apologize if my questions are somehow very basic.

I have a CoO slab optimized suing PBE + U (spin polarized) . The final Bader charges for all Co atoms are ~ +1.24 and for O are ~ -1.24.

1. Should n't the charges of atoms at the ...
by kambiz
Mon Apr 07, 2014 10:25 pm
Forum: VTSTTools
Topic: pre-convergence before Cl-NEB
Replies: 2
Views: 74038

Re: pre-convergence before Cl-NEB

Thanks dear Prof. for your reply,

But, is n't the option 2 a faster way? We can decrease the forces acting on images to a specified value using regular NEB. Then we can run our Cl-NEB. I dont think this method, technically,is wrong. Could you please enlighten me about this matter?

I m conducting ...
by kambiz
Mon Apr 07, 2014 8:41 am
Forum: VTSTTools
Topic: How many images should I set up?
Replies: 1
Views: 59472

Re: How many images should I set up?

I think this is a very general question. One way is to see the distance between your initial and final ones and then see how many images can be considered as proper. I usually use 4, 6 or 8 depending on the nature of my calculations.

Cheers
by kambiz
Mon Apr 07, 2014 7:55 am
Forum: VTSTTools
Topic: pre-convergence before Cl-NEB
Replies: 2
Views: 74038

pre-convergence before Cl-NEB

Hi,

I just have a dummy question. I have three options to run a Cl-NEB

1. Run a NEB with force criterion of 0.4 - 0.5 eV/atom and then run a Cl-NEB
2. Run a NEB with force criterion of 0.05 - 0.1 eV/atom and then run a Cl-NEB
3. Run a Cl-NEB from scratch

My force criterion for Cl-NEB is 0.05 eV ...
by kambiz
Fri Jul 19, 2013 11:38 am
Forum: VTSTTools
Topic: NEB convergence
Replies: 0
Views: 54820

NEB convergence

Dear Prof. Graeme,

I have a problem with my NEB calculation. First I used IBRION = 3 and POTIM = 0.03 to decrease the forces below 0.8. Then I used different optimizers to continue the calculations. But after some steps the forces become high. I used LBFGS, FIRE and Damped MD as optimizers to ...
by kambiz
Tue Jul 16, 2013 6:52 am
Forum: VTSTTools
Topic: the structure is damaged using the NEB calculation
Replies: 1
Views: 60417

Re: the structure is damaged using the NEB calculation

Hi,

I was wondering that what you mean by "damage". Besides, why is your force convergence so high?
by kambiz
Tue Jun 18, 2013 4:07 am
Forum: VTSTTools
Topic: forces on images (NEB)
Replies: 2
Views: 77031

Re: forces on images (NEB)

Thanks
That works for me
by kambiz
Mon Jun 17, 2013 3:56 am
Forum: VTSTTools
Topic: forces on images (NEB)
Replies: 2
Views: 77031

forces on images (NEB)

Hi,

I was wondering, during a typical NEB, how we can see the forces acting on each image after any ionic steps."nebef.pl" shows the forces for the last ionic step, but I want to see the forces for previous steps.

I d really appreciate if any one can help me.

Cheers
by kambiz
Fri Feb 22, 2013 2:37 am
Forum: VTSTTools
Topic: Pre-Exponential factor calculation
Replies: 7
Views: 171930

Re: Pre-Exponential factor calculation

It has been described in many kinetics books, such as http://www.amazon.com/Concepts-Modern-C ... 3527316728.

Cheers
Kambiz
by kambiz
Fri Feb 22, 2013 2:32 am
Forum: VTSTTools
Topic: NEB computation for CH3O + H reaction
Replies: 4
Views: 110578

Re: NEB computation for CH3O + H reaction

Hi,
Sorry, but just a question,
So after using IOPT=7, all forces are less than 0.1 and then after using IOPT = 1, the job is not converging??

Cheers
by kambiz
Fri May 11, 2012 4:24 am
Forum: VTSTTools
Topic: Spring = 5 or -5?
Replies: 4
Views: 111287

Re: Spring = 5 or -5?

Hi,
yes, I usually use a value between -5 to -1.

Cheers
by kambiz
Wed May 02, 2012 11:38 pm
Forum: VTSTTools
Topic: Spring = 5 or -5?
Replies: 4
Views: 111287

Re: Spring = 5 or -5?

I think this is not related to this forum.

Taken from VASP manual:

For SPRING=0, each image is only allowed to move into the direction perpendicular to the current hyper-tangent, which
is calculated as the normal vector between two neighboring images.

The nudged elastic band method is applied ...
by kambiz
Wed May 02, 2012 7:10 am
Forum: VTSTTools
Topic: split_dos
Replies: 2
Views: 83962

Re: split_dos

Thanks a lot,

That was what I thought.

cheers
by kambiz
Fri Apr 13, 2012 12:52 am
Forum: VTSTTools
Topic: split_dos
Replies: 2
Views: 83962

split_dos

I d really appreciate it if you answer my question.

After using "split_dos" the DOSXX files have 7 columns. What are those columns?

Cheers
by kambiz
Wed Mar 28, 2012 1:41 am
Forum: Bader
Topic: partial charges in different orbtials
Replies: 0
Views: 60912

partial charges in different orbtials

Hi,

I was wondering is it possible to know about the partial charges in different orbitals(s, p, d), using the Bader program?

Cheers