Dear Administrator,
I have downloaded and used the new version 2.03. Still the problem of having different energy gradiances for dimer output and for single point output exists. Please check again. The problem still exists in the newer version also.
Search found 16 matches
- Wed Jun 20, 2007 7:47 am
- Forum: VTSTTools
- Topic: Problem of energy gradiance still exists
- Replies: 0
- Views: 44928
- Wed Jun 20, 2007 7:45 am
- Forum: VTSTTools
- Topic: Single point calculation
- Replies: 5
- Views: 103977
Problem still exists
Dear Administrator,
I have downloaded and used the new version 2.03. Still the problem of having different energy gradiances for dimer output and for single point output, exists. Please check again. The problem still exists
I have downloaded and used the new version 2.03. Still the problem of having different energy gradiances for dimer output and for single point output, exists. Please check again. The problem still exists
- Tue Jun 05, 2007 7:37 am
- Forum: VTSTTools
- Topic: Dimer derived structure to single point calculation
- Replies: 1
- Views: 49784
Dimer derived structure to single point calculation
Dear Administrator,
I have dimer calculation completed and showing the forces less than 0.001 eV/A. Upon doing a single point calculation the forces rices to 0.04 eV/A. As previously suggested by you I have checked the CENTCAR, CONTCAR and transforming the x y z coordinates obtained in OUTCAR, but ...
I have dimer calculation completed and showing the forces less than 0.001 eV/A. Upon doing a single point calculation the forces rices to 0.04 eV/A. As previously suggested by you I have checked the CENTCAR, CONTCAR and transforming the x y z coordinates obtained in OUTCAR, but ...
- Mon Jun 04, 2007 11:06 am
- Forum: VTSTTools
- Topic: Single point calculation
- Replies: 5
- Views: 103977
- Wed Mar 28, 2007 4:13 pm
- Forum: VTSTTools
- Topic: Single point calculation
- Replies: 5
- Views: 103977
Single point calculation
Dear Administrator,
I have few dimer runs, which has really zero energy gradiance. I took this and did a single point geometry optimization using VASP and found higher energy gradiances of about 0.04 eV/angstrom.
Why is this happening? Or am I doing some thing wrong?
I have few dimer runs, which has really zero energy gradiance. I took this and did a single point geometry optimization using VASP and found higher energy gradiances of about 0.04 eV/angstrom.
Why is this happening? Or am I doing some thing wrong?
- Sun Mar 25, 2007 11:46 am
- Forum: VTSTTools
- Topic: second run of Dimer method
- Replies: 1
- Views: 49989
second run of Dimer method
Dear Administrator,
I have done few NEB image calculations and finally ended up with one image which is close to TS. And then I decided to do Dimer calculation with this structure as the starting POSCAR and MODECAR derived from the initial and final POSCARS using the modemake.pl script. Finally I ...
I have done few NEB image calculations and finally ended up with one image which is close to TS. And then I decided to do Dimer calculation with this structure as the starting POSCAR and MODECAR derived from the initial and final POSCARS using the modemake.pl script. Finally I ...
- Wed Mar 14, 2007 8:51 am
- Forum: VTSTTools
- Topic: Dimer method and its convergence
- Replies: 3
- Views: 75713
- Tue Mar 13, 2007 2:28 pm
- Forum: VTSTTools
- Topic: Dimer method and its convergence
- Replies: 3
- Views: 75713
Dimer method and its convergence
Dear All,
I am having problem in predicting the TS using the dimer method. Because the criteria in dimer method is to check the calculation for zero force, the calculation is always giving a TS state irrespective of the final state. I have different final states, but the TS what I am getting is ...
I am having problem in predicting the TS using the dimer method. Because the criteria in dimer method is to check the calculation for zero force, the calculation is always giving a TS state irrespective of the final state. I have different final states, but the TS what I am getting is ...
- Sat Mar 10, 2007 9:07 am
- Forum: VTSTTools
- Topic: run the dimer from half way
- Replies: 1
- Views: 50320
run the dimer from half way
Dear Administrator,
Due to unexpected causes if the dimer run stops, how can we start the calculation without loosing the half run?
Is it to start with the CONTCAR making it a POSCAR and making NEWMODECAR as MODECAR?
Am I right? Or is there some thing else?
Thank you for all your support
Due to unexpected causes if the dimer run stops, how can we start the calculation without loosing the half run?
Is it to start with the CONTCAR making it a POSCAR and making NEWMODECAR as MODECAR?
Am I right? Or is there some thing else?
Thank you for all your support
- Thu Mar 08, 2007 4:13 pm
- Forum: VTSTTools
- Topic: Sample run of DIMER method and problems there in
- Replies: 1
- Views: 50639
Sample run of DIMER method and problems there in
HI All,
This is the sample dimer run I did for the already found TS using NEB method. And the DIMCAR shows that it is not convergent and the calculation is going on. MODECAR is generated randomly by the run.
TRANSITION STATE POSCAR
Ag (110)
4.13999999999999968
1.4142135623730001 ...
This is the sample dimer run I did for the already found TS using NEB method. And the DIMCAR shows that it is not convergent and the calculation is going on. MODECAR is generated randomly by the run.
TRANSITION STATE POSCAR
Ag (110)
4.13999999999999968
1.4142135623730001 ...
- Wed Mar 07, 2007 10:33 pm
- Forum: VTSTTools
- Topic: Will dimer method work for fixed substrates
- Replies: 4
- Views: 87539
- Wed Mar 07, 2007 5:11 pm
- Forum: VTSTTools
- Topic: Will dimer method work for fixed substrates
- Replies: 4
- Views: 87539
- Wed Mar 07, 2007 11:11 am
- Forum: VTSTTools
- Topic: Will dimer method work for fixed substrates
- Replies: 4
- Views: 87539
Will dimer method work for fixed substrates
Dear All,
I would like to know whether the dimer method works well for the fixed substrates and the molecule alone relaxed? In my calculation I have the substrate fixed and the 6 atoms of the molecule relaxed. I have started the new version of VTST tools with the approximate POSACR close to saddle ...
I would like to know whether the dimer method works well for the fixed substrates and the molecule alone relaxed? In my calculation I have the substrate fixed and the 6 atoms of the molecule relaxed. I have started the new version of VTST tools with the approximate POSACR close to saddle ...
- Sat Mar 03, 2007 12:48 pm
- Forum: VTSTTools
- Topic: How to run the VASP calculation with Dimer method
- Replies: 3
- Views: 78162
- Fri Mar 02, 2007 9:59 am
- Forum: VTSTTools
- Topic: How to run the VASP calculation with Dimer method
- Replies: 3
- Views: 78162
How to run the VASP calculation with Dimer method
Dear Administrator,
Could you please list down the steps to be taken to run VASP with dimer method. I have many doubts about the run. I already have an approximate guess for transition state, now I want to use dimer method to get the exact TS. Please let me know step by step procedure to perform ...
Could you please list down the steps to be taken to run VASP with dimer method. I have many doubts about the run. I already have an approximate guess for transition state, now I want to use dimer method to get the exact TS. Please let me know step by step procedure to perform ...